=>> Building science/py-pyked build started at Fri Jun 5 21:17:37 JST 2026 port directory: /usr/ports/science/py-pyked package name: py311-pyked-0.4.1.16_5 building for: FreeBSD curamd64-setuptools-job-01 16.0-CURRENT FreeBSD 16.0-CURRENT 1600018 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1015 May 2 10:23 /usr/ports/science/py-pyked/Makefile Ports top last git commit: a8b187544 Ports top unclean checkout: yes Port dir last git commit: a8b187544 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.4 Host OSVERSION: 1600018 Jail OSVERSION: 1600018 Job Id: 01 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1600018 UNAME_v=FreeBSD 16.0-CURRENT 1600018 UNAME_r=16.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.4 MASTERMNT=/usr/local/poudriere/data/.m/curamd64-setuptools/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color GID=0 OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 UID=0 PWD=/usr/local/poudriere/data/.m/curamd64-setuptools/01/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=curamd64-setuptools SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/curamd64-setuptools/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.4 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyked/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyked/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-pyked/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyked/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyked/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd16 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=16.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/py311-pyked" EXAMPLESDIR="share/examples/py311-pyked" DATADIR="share/py311-pyked" WWWDIR="www/py311-pyked" ETCDIR="etc/py311-pyked" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd16 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py311-pyked DOCSDIR=/usr/local/share/doc/py311-pyked EXAMPLESDIR=/usr/local/share/examples/py311-pyked WWWDIR=/usr/local/www/py311-pyked ETCDIR=/usr/local/etc/py311-pyked --End SUB_LIST-- ---Begin make.conf--- DEFAULT_VERSIONS+= magick=7-x11 DEFAULT_VERSIONS+= pgsql=18 DEFAULT_VERSIONS+= ssl=openssl japanese_fcitx5_mozc_SET= EDICT2 PERSONALNAME PLACENAME SUDACHIDICT UTDIC japanese_mozc_server_SET= EDICT2 PERSONALNAME PLACENAME SUDACHIDICT UTDIC japanese_mozc_server_UNSET= JAWIKI x11_wm_hikari_SET= GAMMA INPUTMETHOD LAYERSHELL SCREENCOPY VIRTUALINPUT X11 .if $(.CURDIR:M*/x11-wm/hikari) WITH_DEBUG= YES .endif USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### DEFAULT_VERSIONS+= magick=7-x11 DEFAULT_VERSIONS+= pgsql=18 DEFAULT_VERSIONS+= ssl=openssl japanese_fcitx5_mozc_SET= EDICT2 PERSONALNAME PLACENAME SUDACHIDICT UTDIC japanese_mozc_server_SET= EDICT2 PERSONALNAME PLACENAME SUDACHIDICT UTDIC japanese_mozc_server_UNSET= JAWIKI x11_wm_hikari_SET= GAMMA INPUTMETHOD LAYERSHELL SCREENCOPY VIRTUALINPUT X11 .if $(.CURDIR:M*/x11-wm/hikari) WITH_DEBUG= YES .endif #### Misc Poudriere #### .include "/etc/make.conf.ports_env" DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 12099 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> License BSD3CLAUSE accepted by the user =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pyked-0.4.1.16_5 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.7.5.pkg [curamd64-setuptools-job-01] Installing pkg-2.7.5... [curamd64-setuptools-job-01] Extracting pkg-2.7.5: .......... done ===> py311-pyked-0.4.1.16_5 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-pyked-0.4.1.16_5 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user => pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz doesn't seem to exist in /portdistfiles. => Attempting to fetch https://codeload.github.com/pr-omethe-us/PyKED/tar.gz/v0.4.1-16-gfcccaf8?dummy=/pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz fetch: https://codeload.github.com/pr-omethe-us/PyKED/tar.gz/v0.4.1-16-gfcccaf8?dummy=/pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz: size unknown fetch: https://codeload.github.com/pr-omethe-us/PyKED/tar.gz/v0.4.1-16-gfcccaf8?dummy=/pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz: size of remote file is not known pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz 375 kB 6729 kBps 00s ===> Fetching all distfiles required by py311-pyked-0.4.1.16_5 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py311-pyked-0.4.1.16_5 for building => SHA256 Checksum OK for pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py311-pyked-0.4.1.16_5 for building ===> Extracting for py311-pyked-0.4.1.16_5 => SHA256 Checksum OK for pr-omethe-us-PyKED-v0.4.1-16-gfcccaf8_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Patching for py311-pyked-0.4.1.16_5 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pyked-0.4.1.16_5 depends on package: py311-setuptools>=63.1.0 - not found ===> Installing existing package /packages/All/py311-setuptools-81.0.0.pkg [curamd64-setuptools-job-01] Installing py311-setuptools-81.0.0... [curamd64-setuptools-job-01] `-- Installing py311-more-itertools-10.6.0... [curamd64-setuptools-job-01] | `-- Installing python311-3.11.15_2... [curamd64-setuptools-job-01] | | `-- Installing gettext-runtime-1.0... [curamd64-setuptools-job-01] | | `-- Installing indexinfo-0.3.1_1... [curamd64-setuptools-job-01] | | `-- Extracting indexinfo-0.3.1_1: .... done [curamd64-setuptools-job-01] | | `-- Extracting gettext-runtime-1.0: .......... done [curamd64-setuptools-job-01] | | `-- Installing libffi-3.5.1... [curamd64-setuptools-job-01] | | `-- Extracting libffi-3.5.1: .......... done [curamd64-setuptools-job-01] | | `-- Installing mpdecimal-4.0.1... [curamd64-setuptools-job-01] | | `-- Extracting mpdecimal-4.0.1: .......... done [curamd64-setuptools-job-01] | | `-- Installing openssl-3.0.20,1... [curamd64-setuptools-job-01] | | `-- Extracting openssl-3.0.20,1: .......... done [curamd64-setuptools-job-01] | | `-- Installing readline-8.3.3... [curamd64-setuptools-job-01] | | `-- Extracting readline-8.3.3: .......... done [curamd64-setuptools-job-01] | `-- Extracting python311-3.11.15_2: .......... done [curamd64-setuptools-job-01] `-- Extracting py311-more-itertools-10.6.0: .......... done [curamd64-setuptools-job-01] `-- Installing py311-packaging-26.2... [curamd64-setuptools-job-01] `-- Extracting py311-packaging-26.2: .......... done [curamd64-setuptools-job-01] `-- Installing py311-wheel-0.47.0... [curamd64-setuptools-job-01] `-- Extracting py311-wheel-0.47.0: .......... done [curamd64-setuptools-job-01] Extracting py311-setuptools-81.0.0: .......... done ===== Message from python311-3.11.15_2: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-pyked-0.4.1.16_5 depends on package: py311-setuptools>=63.1.0 - found ===> Returning to build of py311-pyked-0.4.1.16_5 ===> py311-pyked-0.4.1.16_5 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Configuring for py311-pyked-0.4.1.16_5 /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /usr/local/lib/python3.11/site-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running config =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building for py311-pyked-0.4.1.16_5 /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /usr/local/lib/python3.11/site-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_py creating build/lib/pyked copying pyked/__init__.py -> build/lib/pyked copying pyked/_version.py -> build/lib/pyked copying pyked/chemked.py -> build/lib/pyked copying pyked/converters.py -> build/lib/pyked copying pyked/orcid.py -> build/lib/pyked copying pyked/validation.py -> build/lib/pyked creating build/lib/pyked/tests copying pyked/tests/__init__.py -> build/lib/pyked/tests copying pyked/tests/test_chemked.py -> build/lib/pyked/tests copying pyked/tests/test_converters.py -> build/lib/pyked/tests copying pyked/tests/test_validation.py -> build/lib/pyked/tests copying pyked/tests/test_version.py -> build/lib/pyked/tests running egg_info creating pyked.egg-info writing pyked.egg-info/PKG-INFO writing dependency_links to pyked.egg-info/dependency_links.txt writing entry points to pyked.egg-info/entry_points.txt writing requirements to pyked.egg-info/requires.txt writing top-level names to pyked.egg-info/top_level.txt writing manifest file 'pyked.egg-info/SOURCES.txt' reading manifest file 'pyked.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pyked.egg-info/SOURCES.txt' /usr/local/lib/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'pyked.schemas' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyked.schemas' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyked.schemas' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyked.schemas' to be distributed and are already explicitly excluding 'pyked.schemas' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib/pyked/schemas copying pyked/schemas/chemked_schema.yaml -> build/lib/pyked/schemas copying pyked/schemas/composition_schema.yaml -> build/lib/pyked/schemas copying pyked/schemas/ignition_delay_schema.yaml -> build/lib/pyked/schemas copying pyked/schemas/value_unit_schema.yaml -> build/lib/pyked/schemas copying pyked/tests/dataframe_st.csv -> build/lib/pyked/tests copying pyked/tests/rcm_history.csv -> build/lib/pyked/tests copying pyked/tests/testfile_bad.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_many_species.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_rcm.xml -> build/lib/pyked/tests copying pyked/tests/testfile_rcm.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_rcm2.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_rcm_old.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_required.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_st.xml -> build/lib/pyked/tests copying pyked/tests/testfile_st.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_st2.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_st_p5.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_st_thermo.yaml -> build/lib/pyked/tests copying pyked/tests/testfile_uncertainty.yaml -> build/lib/pyked/tests =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pyked-0.4.1.16_5 depends on package: py311-numpy1>=1.16 - not found ===> Installing existing package /packages/All/py311-numpy1-1.26.4_3.pkg [curamd64-setuptools-job-01] Installing py311-numpy1-1.26.4_3... [curamd64-setuptools-job-01] `-- Installing gcc14-14.2.0_4... [curamd64-setuptools-job-01] | `-- Installing binutils-2.44,1... [curamd64-setuptools-job-01] | | `-- Installing zstd-1.5.7_1... [curamd64-setuptools-job-01] | | `-- Extracting zstd-1.5.7_1: .......... done [curamd64-setuptools-job-01] | `-- Extracting binutils-2.44,1: .......... done [curamd64-setuptools-job-01] | `-- Installing gmp-6.3.0... [curamd64-setuptools-job-01] | `-- Extracting gmp-6.3.0: .......... done [curamd64-setuptools-job-01] | `-- Installing mpc-1.4.1... [curamd64-setuptools-job-01] | | `-- Installing mpfr-4.2.2,1... [curamd64-setuptools-job-01] | | `-- Extracting mpfr-4.2.2,1: .......... done [curamd64-setuptools-job-01] | `-- Extracting mpc-1.4.1: .......... done [curamd64-setuptools-job-01] `-- Extracting gcc14-14.2.0_4: .......... done [curamd64-setuptools-job-01] `-- Installing openblas-0.3.30,2... [curamd64-setuptools-job-01] `-- Extracting openblas-0.3.30,2: .......... done [curamd64-setuptools-job-01] Extracting py311-numpy1-1.26.4_3: .......... done ===== Message from gcc14-14.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc14 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> py311-pyked-0.4.1.16_5 depends on package: py311-numpy1>=1.16 - found ===> Returning to build of py311-pyked-0.4.1.16_5 ===> py311-pyked-0.4.1.16_5 depends on package: py311-cerberus>=1.0.0 - not found ===> Installing existing package /packages/All/py311-cerberus-1.3.8_1.pkg [curamd64-setuptools-job-01] Installing py311-cerberus-1.3.8_1... [curamd64-setuptools-job-01] Extracting py311-cerberus-1.3.8_1: .......... done ===> py311-pyked-0.4.1.16_5 depends on package: py311-cerberus>=1.0.0 - found ===> Returning to build of py311-pyked-0.4.1.16_5 ===> py311-pyked-0.4.1.16_5 depends on package: py311-habanero>=0.6.0 - not found ===> Installing existing package /packages/All/py311-habanero-2.3.0.pkg [curamd64-setuptools-job-01] Installing py311-habanero-2.3.0... [curamd64-setuptools-job-01] `-- Installing py311-bibtexparser-1.4.3_1... [curamd64-setuptools-job-01] | `-- Installing py311-pyparsing-3.3.2... [curamd64-setuptools-job-01] | `-- Extracting py311-pyparsing-3.3.2: .......... done [curamd64-setuptools-job-01] `-- Extracting py311-bibtexparser-1.4.3_1: .......... done [curamd64-setuptools-job-01] `-- Installing py311-httpx-0.28.1_2... [curamd64-setuptools-job-01] | `-- Installing py311-anyio-4.13.0... [curamd64-setuptools-job-01] | | `-- Installing py311-idna-3.13... [curamd64-setuptools-job-01] | | `-- Extracting py311-idna-3.13: .......... done [curamd64-setuptools-job-01] | | `-- Installing py311-truststore-0.10.4... [curamd64-setuptools-job-01] | | `-- Extracting py311-truststore-0.10.4: .......... done [curamd64-setuptools-job-01] | | `-- Installing py311-typing-extensions-4.15.0... [curamd64-setuptools-job-01] | | `-- Extracting py311-typing-extensions-4.15.0: .......... done [curamd64-setuptools-job-01] | `-- Extracting py311-anyio-4.13.0: .......... done [curamd64-setuptools-job-01] | `-- Installing py311-certifi-2026.4.22... [curamd64-setuptools-job-01] | `-- Extracting py311-certifi-2026.4.22: .......... done [curamd64-setuptools-job-01] | `-- Installing py311-h2-4.1.0_1... [curamd64-setuptools-job-01] | | `-- Installing py311-hpack-4.0.0_1... [curamd64-setuptools-job-01] | | `-- Extracting py311-hpack-4.0.0_1: .......... done [curamd64-setuptools-job-01] | | `-- Installing py311-hyperframe-6.0.0_1... [curamd64-setuptools-job-01] | | `-- Extracting py311-hyperframe-6.0.0_1: .......... done [curamd64-setuptools-job-01] | `-- Extracting py311-h2-4.1.0_1: .......... done [curamd64-setuptools-job-01] | `-- Installing py311-httpcore-1.0.9... [curamd64-setuptools-job-01] | | `-- Installing py311-h11-0.16.0... [curamd64-setuptools-job-01] | | `-- Extracting py311-h11-0.16.0: .......... done [curamd64-setuptools-job-01] | `-- Extracting py311-httpcore-1.0.9: .......... done [curamd64-setuptools-job-01] | `-- Installing py311-socksio-1.0.0_1... [curamd64-setuptools-job-01] | `-- Extracting py311-socksio-1.0.0_1: .......... done [curamd64-setuptools-job-01] `-- Extracting py311-httpx-0.28.1_2: .......... done [curamd64-setuptools-job-01] `-- Installing py311-pyyaml-6.0.3... [curamd64-setuptools-job-01] | `-- Installing libyaml-0.2.5... [curamd64-setuptools-job-01] | `-- Extracting libyaml-0.2.5: ......... done [curamd64-setuptools-job-01] `-- Extracting py311-pyyaml-6.0.3: .......... done [curamd64-setuptools-job-01] `-- Installing py311-tqdm-4.67.3... [curamd64-setuptools-job-01] `-- Extracting py311-tqdm-4.67.3: .......... done [curamd64-setuptools-job-01] `-- Installing py311-urllib3-2.6.3,1... [curamd64-setuptools-job-01] | `-- Installing py311-pysocks-1.7.1_1... [curamd64-setuptools-job-01] | `-- Extracting py311-pysocks-1.7.1_1: .......... done [curamd64-setuptools-job-01] `-- Extracting py311-urllib3-2.6.3,1: .......... done [curamd64-setuptools-job-01] Extracting py311-habanero-2.3.0: .......... done ===== Message from py311-urllib3-2.6.3,1: -- Since version 1.25 HTTPS connections are now verified by default which is done via "cert_reqs = 'CERT_REQUIRED'". While certificate verification can be disabled via "cert_reqs = 'CERT_NONE'", it's highly recommended to leave it on. Various consumers of net/py-urllib3 already have implemented routines that either explicitly enable or disable HTTPS certificate verification (e.g. via configuration settings, CLI arguments, etc.). Yet it may happen that there are still some consumers which don't explicitly enable/disable certificate verification for HTTPS connections which could then lead to errors (as is often the case with self-signed certificates). In case of an error one should try first to temporarily disable certificate verification of the problematic urllib3 consumer to see if that approach will remedy the issue. ===> py311-pyked-0.4.1.16_5 depends on package: py311-habanero>=0.6.0 - found ===> Returning to build of py311-pyked-0.4.1.16_5 ===> py311-pyked-0.4.1.16_5 depends on package: py311-pint>=0.7.2 - not found ===> Installing existing package /packages/All/py311-pint-0.23_1.pkg [curamd64-setuptools-job-01] Installing py311-pint-0.23_1... [curamd64-setuptools-job-01] Extracting py311-pint-0.23_1: .......... done ===> py311-pyked-0.4.1.16_5 depends on package: py311-pint>=0.7.2 - found ===> Returning to build of py311-pyked-0.4.1.16_5 ===> py311-pyked-0.4.1.16_5 depends on package: py311-uncertainties>=3.0.1 - not found ===> Installing existing package /packages/All/py311-uncertainties-3.2.2_1.pkg [curamd64-setuptools-job-01] Installing py311-uncertainties-3.2.2_1... [curamd64-setuptools-job-01] `-- Installing py311-future-0.18.3_1... [curamd64-setuptools-job-01] `-- Extracting py311-future-0.18.3_1: .......... done [curamd64-setuptools-job-01] Extracting py311-uncertainties-3.2.2_1: .......... done ===> py311-pyked-0.4.1.16_5 depends on package: py311-uncertainties>=3.0.1 - found ===> Returning to build of py311-pyked-0.4.1.16_5 ===> py311-pyked-0.4.1.16_5 depends on package: py311-pyyaml>=3.12 - found ===> py311-pyked-0.4.1.16_5 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Staging for py311-pyked-0.4.1.16_5 ===> Generating temporary packing list /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /usr/local/lib/python3.11/site-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running install /usr/local/lib/python3.11/site-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing pyked.egg-info/PKG-INFO writing dependency_links to pyked.egg-info/dependency_links.txt writing entry points to pyked.egg-info/entry_points.txt writing requirements to pyked.egg-info/requires.txt writing top-level names to pyked.egg-info/top_level.txt reading manifest file 'pyked.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pyked.egg-info/SOURCES.txt' /usr/local/lib/python3.11/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'pyked.schemas' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyked.schemas' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyked.schemas' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyked.schemas' to be distributed and are already explicitly excluding 'pyked.schemas' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) running install_lib creating /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages creating /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked copying build/lib/pyked/__init__.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked copying build/lib/pyked/_version.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked copying build/lib/pyked/chemked.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked copying build/lib/pyked/converters.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked copying build/lib/pyked/orcid.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked copying build/lib/pyked/validation.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked creating /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/__init__.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/test_chemked.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/test_converters.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/test_validation.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/test_version.py -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/dataframe_st.csv -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/rcm_history.csv -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_bad.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_many_species.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_rcm.xml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_rcm.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_rcm2.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_rcm_old.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_required.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_st.xml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_st.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_st2.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_st_p5.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_st_thermo.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests copying build/lib/pyked/tests/testfile_uncertainty.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests creating /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/schemas copying build/lib/pyked/schemas/chemked_schema.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/schemas copying build/lib/pyked/schemas/composition_schema.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/schemas copying build/lib/pyked/schemas/ignition_delay_schema.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/schemas copying build/lib/pyked/schemas/value_unit_schema.yaml -> /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/schemas byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/_version.py to _version.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/chemked.py to chemked.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/converters.py to converters.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/orcid.py to orcid.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/validation.py to validation.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests/test_chemked.py to test_chemked.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests/test_converters.py to test_converters.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests/test_validation.py to test_validation.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked/tests/test_version.py to test_version.cpython-311.pyc writing byte-compilation script '/tmp/tmp7bew9s8x.py' /usr/local/bin/python3.11 /tmp/tmp7bew9s8x.py removing /tmp/tmp7bew9s8x.py running install_egg_info Copying pyked.egg-info to /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/lib/python3.11/site-packages/pyked-0.4.2a1-py3.11.egg-info running install_scripts Installing ck2respth script to /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/bin Installing convert_ck script to /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/bin Installing respth2ck script to /wrkdirs/usr/ports/science/py-pyked/work-py311/stage/usr/local/bin writing list of installed files to '/wrkdirs/usr/ports/science/py-pyked/work-py311/.PLIST.pymodtmp' ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX Move: bin/ck2respth --> bin/ck2respth-3.11 Link: @bin/ck2respth --> bin/ck2respth-3.11 Move: bin/convert_ck --> bin/convert_ck-3.11 Link: @bin/convert_ck --> bin/convert_ck-3.11 Move: bin/respth2ck --> bin/respth2ck-3.11 Link: @bin/respth2ck --> bin/respth2ck-3.11 ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2026-06-05T12:17:37+0000' 'PKG_NOTE_ports_top_git_hash=a8b187544' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=a8b187544' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.4' NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building packages for py311-pyked-0.4.1.16_5 ===> Building py311-pyked-0.4.1.16_5 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-pyked-0.4.1.16_5 build of science/py-pyked@py311 | py311-pyked-0.4.1.16_5 ended at Fri Jun 5 21:24:21 JST 2026 build time: 00:10:32